From:Comprehensive assembly and analysis of the transcriptome of maritime pine developing embryos
| Embryo developmental stage | Day0 | Day5 | Day11 | Day15 | Day25 |
|---|---|---|---|---|---|
| Read lengtha | PE 50 bp | PE 50 bp | PE 50 bp | PE 100 bp | PE 100 bp |
| Raw pairs of reads | 72,632,308 | 55,550,140 | 44,898,746 | 75,433,086 | 70,463,384 |
| Clean pairs of reads | 72,472,236 | 55,413,990 | 44,803,454 | 66,982,962 | 62,388,454 |
| Pairs of reads mapping in correct distance and orientation onP. taedagenome (Properlypaired) used for assembly | 61,626,536 | 45,975,573 | 37,763,000 | 60,334,604 | 55,692,971 |
| Pairs of reads properly mapping onP. pinastercomprehensive transcriptome used for expression | 44,178,974 | 33,660,866 | 28,187,082 | 41,345,428 | 35,994,032 |