| Position in chloroplast genome | Polymorphism between clades B/A | Gene | Amino acid change or predicted SNP impact (Genescan) |
|---|---|---|---|
| 412 | T /C | psbA | no |
| 4547 | G /T | rps16 exon 2 | no |
| 6282 | T/C | – | |
| 6608 | G/T | – | |
| 7134 | T/C | psbK | no |
| 8127 | A/G | – | |
| 8599 | G/A Mixed | – | |
| 12496 | A/G | – | |
| 12799 | G/A | Intron trnM-CAU | |
| 12819–12820 | TA/CC | – | |
| 13468 | A/T | – | |
| 14231 | A/G | trnl | RNA |
| 15908 | T/A Mixed | intron trnY-GUA gene | |
| 17203 | A/G | – | |
| 17746–17747 | GG/AA | – | |
| 18479 | T/G | – | |
| 18520 | G/A | – | |
| 20587 | T/A | rpoB | no |
| 28019 | G/T | rpoC2 | Tryptophan to leucine W to L |
| 29113 | A/G | rpoC2 | Asparagine to aspartic acid N to D |
| 35382 | G/A | atpA | no |
| 49856 | C/T | – | |
| 50250 | A/C | – | |
| 51349 | T/A Mixed | intron trnS-ACU gene | |
| 52147 | C/T Mixed | atpB | no |
| 53521 | C/T | – | |
| 55788 | G/T | – | |
| 56588 | T/C | Acetyl-CoA | no |
| 56861 | C/T | Acetyl-CoA | no |
| 60995 | T/G | – | |
| 64166 | C/A | – | |
| 66402 | A/G | rpl20 | Serine to proline 年代P |
| 69349 | C/T Mixed | psbB | Alanine to valine A to V |
| 74268 | A/C Mixed | – | |
| 77793 | G/A | rpl16 exon 2 | no |
| 93081–93083 | AAA/TTT | – | |
| 102927 | C/T | ndhF | no |
| 104286 | G/A | – | |
| 106348 | G/T | – | |
| 108269 | G/A | – | |
| 108662 | C/ | – | |
| 109142 | A/G | – | |
| 113077 | G/T | ndhH | no |
| 122035 | TTT/AAA | – | |
| 125723 | A-G Very Mixed | – | |
| 125779 | G-T Very Mixed | – | |
| 125800 | G-A Very Mixed | – |