Table 2 Expression of the genes in the early axillary meristem tissues and effects of RNA interference

From:Inhibition of lateral shoot formation by RNA interference and chemically induced mutations to genes expressed in the axillary meristem ofNicotiana tabacumL.

Gene	RNAseq counts (Reads Per Kilobase of exon per Million mapped sequence reads)			Effect of RNAi measured relative to null segregants ± SD
				RNA expression	Primary lateral shoots		Secondary lateral shoots
	EA	VE	Control	RNA expression	Number	Weight	Number	Weight
NtLs	1.16	62.97	1.14	0.50 ± 0.08	1.00 ± 0.00	1.28 ± 0.15	0.13 ± 0.09^a	0.1 ± 0.06^a
NtBl1	12.80	108.85	8.43	0.31 ± 0.05	1.02 ± 0.06	1.21 ± 0.18	0.00 ± 0.00^a	0.00 ± 0.00^a
NtBl2	ND	ND	ND	0.19 ± 0.04	1.00 ± 0.00	1.13 ± 0.15	1.00 ± 0.10	1.46 ± 1.65
NtBl3	11.88	23.20	10.26	0.30 ± 0.09	1.00 ± 0.00	1.45 ± 0.48	0.88 ± 0.46	0.77 ± 0.12
NtREV	110.74	167.99	305.61	0.62 ± 0.10	1.00 ± 0.00	0.98 ± 0.09	0.06 ± 0.10^a	0.03 ± 0.04^a
NtCUC1	4.24	10.32	8.38	0.16 ± 0.07	1.00 ± 0.00	1.05 ± 0.12	0.91 ± 0.18	0.57 ± 0.10
NtCUC2	ND	ND	ND	0.53 ± 0.04	1.00 ± 0.00	1,14 ± 0.26	0.97 ± 0.12	1.06 ± 0.4
NtCUC3	ND	ND	ND	0.17 ± 0.10	1.00 ± 0.00	0.96 ± 0.17	1.08 ± 0.01	0.71 ± 0.26
NtCUC4	ND	ND	ND	0.69 ± 0.03	1.00 ± 0.00	0.91 ± 0.04	1.05 ± 0.09	0.75 ± 0.19
NtFHY3	23.49	36.90	46.59	0.31 ± 0.17	1.00 ± 0.00	0.94 ± 0.08	1.03 ± 0.11	1.12 ± 0.62
NtLOM1	36.69	49.15	65.87	0.38 ± 0.06	1.00 ± 0.00	1.09 ± 0.15	1.72 ± 1.97	2.56 ± 3.99
NtLOF1	30.27	60.57	25.56	0.38 ± 0.11	1.01 ± 0.02	1.67 ± 0.15	0.28 ± 0.30	0.64 ± 0.58
EA1	32.93	2.30	ND	0.09 ± 0.03	1.00 ± 0.00	1.14 ± 0.16	0.97 ± 0.15	1.21 ± 0.34
EA2	20.13	9.70	1.48	0.28 ± 0.16	1.00 ± 0.00	1.17 ± 0.35	1.34 ± 0.82	1.65 ± 1.59
EA3	22.56	1.77	ND	0.16 ± 0.03	1.00 ± 0.00	0.93 ± 0.09	0.68 ± 0.16	1.42 ± 1.53
EA4	43.22	2.50	1.19	0.35 ± 0.17	1.00 ± 0.00	1.16 ± 0.28	1.14 ± 0.41	1.09±0.38
EA5	14.41	ND	ND	0.10 ± 0.04	1.00 ± 0.00	1.04 ± 0.07	4.05 ± 2.21	18.88 ± 28.34
EA6	22.78	ND	ND	0.80 ± 0.22	1.00 ± 0.00	1.01 ± 0.26	1.04 ± 0.27	1.30 ± 0.80
EA7	12.14	ND	ND	0.10 ± 0.01	1.00 ± 0.00	1.02 ± 0.17	0.83 ± 0.76	0.77 ± 0.70
EA8	43.57	ND	1.47	0.02 ± 0.02	1.00 ± 0.00	1.08 ± 0.36	1.14 ± 0.11	1.21 ± 0.2
EA9	14.03	ND	ND	0.17 ± 0.12	1.00 ± 0.00	0.95 ± 0.17	1.10 ± 0.77	1.16 ± 0.74
EA10	51.93	8.72	1.25	0.43 ± 0.08	1.00 ± 0.00	1.33 ± 0.16	1.59 ± 0.99	0.96 ± 0.21
EA11	19.63	1.70	1.62	0.56 ± 0.08	1.00 ± 0.00	0.98 ± 0.27	0.98 ± 0.09	1.52 ± 0.92
VE1	39.71	49.37	3.79	0.58 ± 0.06	1.00 ± 0.00	0.99 ± 0.30	1.10 ± 0.16	1.27 ± 0.51
VE2	26.70	32.21	0.69	0.51 ± 0.02	1.00 ± 0.00	1.04 ± 0.12	1.09 ± 0.17	0.95 ± 0.54
VE3	6.51	49.14	ND	1.51 ± 0.05	1.00 ± 0.00	1.16 ± 0.21	1.02 ± 0.45	0.97 ± 0.35
VE4	ND	10.94	ND	0.32 ± 0.04	1.00 ± 0.00	1.27 ± 0.31	0.80 ± 0.38	0.95 ± 0.64
VE5	20.88	79.27	3.12	0.41 ± 0.06	1.00 ± 0.00	1.00 ± 0.17	1.3 ± 0.74	1.41 ± 0.84
VE6	2.61	31.26	ND	0.35 ± 0.14	1.00 ± 0.00	0.73 ± 0.12	2.06 ± 0.56	4.57 ± 3.20
VE7	ND	73.71	4.97	0.08 ± 0.02	1.00 ± 0.00	1.49 ± 0.30	0.33 ± 0.09^a	0.26 ± 0.11^a
VE8	5.93	13.38	ND	0.14 ± 0.06	1.00 ± 0.00	1.01 ± 0.28	1.41 ± 0.43	0.87 ± 0.39
VE9	5.06	14.07	ND	0.62 ± 0.08	1.00 ± 0.00	0.98 ± 0.10	1.03 ± 0.16	0.90 ± 0.12
VE10	9.42	21.58	1.86	0.42 ± 0.04	1.00 ± 0.00	0.97 ± 0.25	1.16 ± 0.62	1.79 ± 1.29
VE11	ND	13.62	ND	0.70±0.07	1.00 ± 0.00	1.07 ± 0.28	0.58 ± 0.56	0.42 ± 0.43
VE12	19.79	133.95	11.71	0.18 ± 0.06	1.00 ± 0.00	1.22 ± 0.12	0.29 ± 0.41	0.05 ± 0.08^a
VE13	5.68	19.24	ND	0.14 ± 0.05	1.00 ± 0.00	1.03 ± 0.21	1.03 ± 0.12	1.86 ± 0.94

NDNot detectable
^aSignificantly different from null segregants at the 1% level as determined by thet-test, assuming that the means of the relative values were from normal distributions

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Table 2 Expression of the genes in the early axillary meristem tissues and effects of RNA interference

BMC Plant Biology

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