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Table 4 Genes involved in secondary metabolism

From:Differential transcription pathways associated with rootstock-induced dwarfing in breadfruit (Artocarpus altilis) scions

Description Expression pattern 通用电气ne ID
Phenylpropanoid biosynthesis
Caffeic acid 3-O-methyltransferase down trinity_267412, oases_384295
Coniferyl-aldehyde dehydrogenase down trinity_320214, oases_445900, trinity_320212
Shikimate O-hydroxycinnamoyltransferase; HCT down oases_375831; trinity_347573,
oases_375847, trinity_44469, oases_375829
P-coumaroyl ester 3'-hydroxylase; C3'H down oases_4947, oases_4919, oases_4943
ß-glucosidase down oases_241103, oases_241107, oases_278543
Caffeoyl-CoA O-methyltransferase up oases_399468
Cinnamyl-alcohol dehydrogenase; CAD up trinity_96535, oases_222834
Cinnamoyl-CoA reductase; CCR up oases_222835, oases_222840, oases_222837
Feruloyl-CoA 6-hydroxylase; F6H up oases_511410
Flavonoid biosynthesis
Bifunctional dihydroflavonol 4-reductase/ flavanone 4-reductase up trinity_95243
Chalcone synthase; CHS up trinity_18046
Flavanone 2-hydroxylase up oases_557081
Flavanone 3-hydroxylase up oases_327990
Isoflavone 2'-hydroxylase up trinity_142768
Isoflavone 3'-hydroxylase up trinity_142768, oases_517633, oases_531828
Anthocyanidin synthase up oases_532538
Anthocyanidin 3-O-glucosyltransferase up trinity_193322
Polyphenol oxidase up oases_488858, oases_488859
Isoprenoid biosynthesis
1-deoxy-D-xylulose-5-phosphate synthase; dxs down oases_47553, oases_47552, oases_128123,
oases_128124, oases_475380, oases_128110
Hydroxymethylglutaryl-CoA reductase; HMGR down trinity_239528, oases_223526, oases_223530
Farnesyl diphosphate synthase down oases_327788
通用电气ranylgeranyl diphosphate synthase down trinity_12151
Squalene synthase down oases_109614, oases_109610
Myrcene synthase down oases_421237
Pinene synthase down oases_372831