Table 1 Data sources of thirty-six TCM genomes

From:TCM-Blast for traditional Chinese medicine genome alignment with integrated resources

Latin name	Pin Yin	通用电气nome sequencing method	Reference
Dendrobium Offcinale	Tiepishihu	combining the second-generation Illumina Hiseq 2000 and third-generation PacBio sequencing technologies	Ref [8]
Ginkgo Biloba	Yinxing	Hiseq 2000/4000 platform	Ref [5]
Erigeron Breviscapusd	Dengzhanhua	Illumina sequencing and PacBio single-molecular real-time sequencing on the Illumina HiSeq platform	Ref [24]
Panax Ginseng	Sanqi	Illumina paired-end libraries for the whole-genome sequencing	Ref [26]
Eucommia Ulmoides	Duzhong	Illumina HiSeq, MiSeq short-read sequencing,and PacBio single molecular long-read sequencing	Ref [28]
Punica Granatum	Shiliu	Illumina paired-end reads of libraries	Ref [29]
Dioscorea Routundata	Shanyao	Illumina MiSeq platform, HiSeq 2500 platform	Ref [30]
Ginseng	Renshen	paired-end sequencing on the HiSeq X-Ten platform (Illumina)	Ref [21]
Boea Hygrometrica	Niuercao	whole-genome shotgun approach (Illumina HiSeq and Roche 454 platforms)	Ref [31]
Jatropha Curcas	Mafengshu	Illumina GAII and HiSeq	Ref [7]
Glycyrrhiza Uralensis	Gancao	short reads from Illumina and long reads from Pacific Biosciences sequencing	Ref [1]
Moringa Oleifera	Lamu	Illumina Hiseq2500TM	Ref [32]
Salvia Miltiorrhiza	Danshen	Illumina sequencing and PacBio sequencing,	Ref [33]
Cannabis Sativa	Dama	Illumina mate-pair library construction and sequencing	Ref [34]
Mentha Longifoli	Bohe	Illumina sequencing, Pacific Biosystems sequencing	Ref [22]
Macleaya Cordata	Boluohui	paired-end sequences on HiSeq 2000	Ref [35]
Calotropis Gigantea	Niuguajiao	Illumina HiSeq 2500	Ref [36]
Rhodiola Rosea	Hongjingtian	Illumina HiSeq 2000/4000 platform using a whole genome shotgun sequencing (WGS) strategy	Ref [37]
Capsicum annuum	Lajiao	Illumina HiSeq 2500
Lilium	Baihe	Illumina HiSeq X Ten
Tupaia belangeri	Baihuabaihe	Illumina HiSeq 2000
Arctium lappa	Niubang	Illumina HiSeq X Ten
Anemone flaccida	Ezhangcao	Illumina HiSeq 2000
Atropa belladonna	Dianqie	RNA-seq for expression abundances
Digitalis purpurea	Zihuayangdihuang	RNA-seq for expression abundances
Dioscorea villosa	Changroumaoshuyu	RNA-seq for expression abundances
Echinacea purpurea	Zizhuiyu	RNA-seq for expression abundances
Hoodia gordonii	Hutieyaxianrenzhang	RNA-seq for expression abundances
Hypericum perforatum	Guanyejinsitao	RNA-seq for expression abundances
Panax quinquefolius	Xiyangshen	RNA-seq for expression abundances
Rauvolfia serpentina	yinduluofumu	RNA-seq for expression abundances
Rosmarinus officinalis	Midiexiang	RNA-seq for expression abundances
Valeriana officinalis	Xiecao	RNA-seq for expression abundances
Camptotheca acuminata	Huaxishu	Illumina sequencing platform	Ref [38]
Catharanthus roseus	Changchunhua	whole genome shotgun sequencing approach	Ref [39]
Lepidium Meyenii	Maca	Illumina HiSeq 2500 platform yielded 1.88 billion reads in ten paired-end libraries	Ref [40]

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Table 1 Data sources of thirty-six TCM genomes

BMC Plant Biology

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